It is of great significance for Chinese government to transform its functions to effectively implement the system reform of water resource management functions and behaviors are shown in the holistic process of the strictest water resource management.Then the establishment of a water market system and the implementation of the strictest water resource management available. According to the six dilemmas pertaining to the transformation of governmental functions,the paper proposes the countermeasures to promote the smooth transformation of the governmental functions in the process of the strictest water resource management，namely，system innovation，fostering of water market，participation of multi-subjects and publicity education.